Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006380.1 Kokia drynarioides strain JFW-HI SEQ_120957, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85501

Tables:   1   

This is table  1  of  1  ( 33 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2706--2923
41
5.2
41
85
3
258
24
26
10
38
1.88
12850--13060
43
4.9
43
80
3
154
32
25
18
23
1.97
18958--19019
26
2.4
26
88
0
88
25
22
16
35
1.94
19058--19159
43
2.3
46
86
6
138
44
2
7
45
1.48
19160--19190
14
2.2
14
94
0
53
35
3
9
51
1.51
19101--19183
29
3.0
28
76
15
82
44
1
7
46
1.38
19174--19258
42
2.0
43
86
2
118
42
3
8
45
1.51
19240--19324
32
2.7
32
75
17
95
50
3
2
43
1.32
19510--19600
22
4.0
22
74
14
85
53
0
2
43
1.12
19510--19577
26
2.8
26
86
8
99
57
0
1
41
1.08
19511--19578
18
3.7
18
80
15
77
57
0
1
41
1.08
19511--19577
8
8.4
8
74
12
66
58
0
1
40
1.07
19693--19754
28
2.1
28
82
8
70
41
3
6
48
1.45
22449--22617
41
4.1
41
83
4
207
22
23
17
37
1.94
22657--22698
22
2.0
21
86
13
59
45
0
2
52
1.13
22986--23012
12
2.2
12
100
0
54
66
0
7
25
1.17
24372--24933
41
13.7
41
72
7
304
22
25
18
33
1.97
24390--24825
123
3.5
122
80
5
409
23
27
17
32
1.97
24390--24825
82
5.3
82
79
7
370
23
27
17
32
1.97
24841--24949
40
2.7
40
76
0
110
21
22
18
38
1.93
32522--32566
21
2.1
21
84
8
56
80
2
13
4
0.97
34606--34754
74
2.0
74
100
0
298
34
16
18
30
1.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36383--36644
133
2.0
135
83
4
334
31
24
18
25
1.98
37905--37945
20
2.0
20
85
9
55
39
14
0
46
1.45
47565--47602
18
2.1
19
90
5
60
60
2
5
31
1.33
49282--49400
28
4.2
28
75
4
105
37
19
18
24
1.94
55286--55430
56
2.6
56
82
0
164
23
22
21
32
1.98
57792--57893
31
3.4
30
69
17
77
28
15
7
48
1.73
57821--57961
31
4.8
28
73
13
122
25
17
8
48
1.74
57792--57961
59
2.9
59
83
0
196
25
15
8
49
1.74
66447--66516
21
3.3
21
100
0
140
25
28
4
41
1.74
81243--81292
23
2.1
25
85
7
68
70
6
8
16
1.32
85286--85331
23
2.0
23
100
0
92
26
21
17
34
1.95

Tables:   1

The End!