Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01000642.1 Kokia drynarioides strain JFW-HI SEQ_111614, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3933
ACGTcount: A:0.37, C:0.15, G:0.14, T:0.33


Found at i:3913 original size:6 final size:6

Alignment explanation


    Indices: 3902--3926  Score: 50
    Period size: 6  Copynumber: 4.2  Consensus size: 6

       3892 CGATGGAAGA

                                         
       3902 GTTGGT GTTGGT GTTGGT GTTGGT G
          1 GTTGGT GTTGGT GTTGGT GTTGGT G

       3927 GGGGTGG


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   19  1.00

ACGTcount: A:0.00, C:0.00, G:0.52, T:0.48


Consensus pattern (6 bp):   
GTTGGT

Done.