Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006431.1 Kokia drynarioides strain JFW-HI SEQ_121013, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73510

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2585--2663
34
2.3
34
80
0
95
26
18
11
43
1.84
4663--4834
88
2.0
88
96
0
317
33
16
24
25
1.96
8033--8072
12
3.6
12
80
19
50
75
0
0
25
0.81
11281--11308
13
2.2
13
100
0
56
32
7
25
35
1.83
11649--11729
40
2.0
40
100
0
162
22
9
19
48
1.78
17268--17369
48
2.1
48
90
0
159
24
16
1
56
1.50
19069--19130
29
2.2
29
80
8
74
51
0
0
48
1.00
19066--19170
52
2.1
49
82
8
122
48
0
0
50
1.07
24804--24839
16
2.1
18
90
10
58
50
0
0
50
1.00
26588--26628
20
2.2
19
83
16
50
41
0
0
58
0.98
28809--28833
13
1.9
13
100
0
50
32
0
12
56
1.36
31837--31877
16
2.6
16
92
0
73
53
0
0
46
1.00
32493--32525
16
2.1
17
88
11
52
27
0
21
51
1.48
33778--33826
8
6.2
8
81
13
57
69
2
0
28
1.00
33778--33826
15
3.1
16
77
14
57
69
2
0
28
1.00
33786--33842
23
2.7
21
78
19
64
70
1
0
28
0.98
33781--33836
23
2.4
24
85
14
73
71
1
0
26
0.96
38477--38513
18
2.0
20
89
10
60
13
21
2
62
1.44
42860--42893
3
11.3
3
100
0
68
64
35
0
0
0.94
45268--45293
2
13.0
2
100
0
52
50
0
0
50
1.00
52347--52412
32
2.1
32
82
5
80
36
46
6
10
1.63
64861--64926
34
1.9
34
90
0
105
30
7
30
31
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67113--67154
22
1.9
22
95
0
75
73
4
0
21
1.01
67258--67295
10
3.6
10
92
7
58
68
0
0
31
0.90
67259--67350
40
2.3
40
85
5
116
59
1
1
38
1.12
67262--67335
30
2.5
30
77
0
85
64
1
1
32
1.10
67576--67605
11
2.7
11
94
0
51
40
0
0
60
0.97
69390--69415
2
13.0
2
100
0
52
50
50
0
0
1.00
71184--71211
3
9.3
3
100
0
56
32
0
32
35
1.58
71545--71576
2
16.0
2
93
0
55
53
0
46
0
1.00

Tables:   1

The End!