Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006476.1 Kokia drynarioides strain JFW-HI SEQ_121059, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23436

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2149--2229
22
3.7
22
70
19
62
60
2
1
35
1.18
2738--2781
20
2.2
20
88
8
63
38
0
6
54
1.27
5283--5320
18
2.1
18
90
9
60
50
15
10
23
1.75
5328--5416
43
2.1
43
95
0
160
33
14
2
49
1.56
6243--6278
4
9.2
4
87
6
56
75
2
0
22
0.94
7273--7377
30
3.5
29
81
5
111
43
19
4
32
1.71
7264--7377
60
1.9
59
85
1
156
43
18
4
33
1.70
7447--7484
18
2.2
17
90
4
58
26
0
7
65
1.19
11462--11501
9
4.4
9
81
12
55
77
0
22
0
0.77
11460--11522
27
2.4
27
82
12
78
77
0
20
1
0.85
11473--11525
6
8.2
6
78
14
52
75
0
22
1
0.90
11460--11522
10
5.9
11
72
9
51
77
0
20
1
0.85
12425--12555
49
2.7
50
78
7
135
39
22
22
15
1.91
12822--13631
40
20.5
40
72
7
470
34
24
14
26
1.94
12949--13632
79
8.7
79
80
4
682
34
24
14
26
1.94
12865--13594
158
4.6
158
81
3
790
34
23
15
26
1.95
12869--13630
237
3.2
236
81
4
827
34
23
14
26
1.94
15258--15406
29
5.0
30
83
7
189
38
22
4
34
1.73
15258--15406
59
2.5
61
85
5
207
38
22
4
34
1.73
23237--23270
15
2.2
16
89
5
52
79
0
5
14
0.91
23237--23278
15
2.7
15
82
10
50
73
2
7
16
1.15

Tables:   1

The End!