Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006529.1 Kokia drynarioides strain JFW-HI SEQ_121113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  79470

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3663--3697
6
5.8
6
87
12
54
51
14
2
31
1.57
5231--5268
2
19.0
2
100
0
76
50
0
0
50
1.00
5458--5491
17
1.9
17
88
5
50
67
5
0
26
1.13
7602--7686
26
3.4
26
75
15
65
34
0
0
65
0.93
18863--18890
2
14.0
2
100
0
56
50
0
0
50
1.00
18905--18929
13
1.9
13
100
0
50
28
8
24
40
1.83
32828--32948
54
2.2
54
91
2
190
39
28
4
26
1.77
40169--40201
7
4.7
7
100
0
66
12
0
0
87
0.53
41264--41329
29
2.3
26
78
16
69
56
3
6
34
1.40
42066--42109
21
2.1
21
95
0
79
45
0
9
45
1.35
42537--42579
22
1.9
23
85
4
61
46
4
2
46
1.36
52821--52849
12
2.3
13
94
5
51
62
6
13
17
1.52
63712--63847
69
2.0
69
88
5
204
25
20
22
31
1.98
64197--64337
72
1.9
73
91
1
230
29
15
12
42
1.84
73487--73569
21
3.8
21
72
9
67
66
21
7
4
1.36
73475--73540
33
2.0
34
81
3
80
68
19
6
6
1.33
73470--73561
45
2.0
45
82
0
112
65
21
6
6
1.39
73487--73609
32
3.8
32
77
17
112
67
19
6
6
1.36
73593--73641
18
2.7
18
78
6
55
67
24
4
4
1.26
75660--75691
14
2.3
14
100
0
64
28
0
12
59
1.34

Tables:   1

The End!