Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006578.1 Kokia drynarioides strain JFW-HI SEQ_121165, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38728

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
394--716
21
16.6
21
69
18
198
14
18
28
38
1.90
378--463
37
2.3
37
87
0
127
15
17
30
37
1.90
515--579
16
3.8
16
74
18
58
12
20
29
38
1.89
452--599
37
3.9
37
83
6
163
12
17
30
39
1.87
534--647
58
2.0
58
87
3
167
14
18
26
40
1.89
603--681
37
2.1
37
85
0
104
18
17
24
39
1.92
5402--5478
36
2.1
36
90
0
118
36
27
9
27
1.87
7227--7313
44
2.0
44
83
0
111
44
11
11
32
1.76
8383--8413
11
2.8
11
95
0
53
48
0
3
48
1.17
8853--9026
87
2.0
87
95
0
312
32
22
16
28
1.95
9395--9482
10
9.0
10
69
17
51
50
0
0
50
1.00
9368--9563
50
4.1
50
82
15
238
47
1
0
51
1.07
9368--9524
9
15.9
10
69
25
72
47
0
0
51
1.05
9515--9557
21
2.0
23
90
9
72
53
0
0
46
1.00
9457--9555
40
2.5
39
90
4
146
47
1
0
51
1.07
11489--11524
12
3.1
12
92
4
56
22
5
27
44
1.75
14608--14646
21
1.9
20
89
5
60
23
25
0
51
1.49
14665--14689
9
2.8
9
100
0
50
44
24
0
32
1.54
16102--16174
20
3.2
23
79
15
80
36
4
0
58
1.17
18099--18195
30
3.3
30
73
2
97
39
23
2
35
1.67
18130--18398
29
9.2
28
70
10
148
34
28
4
33
1.76
18091--18398
59
5.2
59
82
3
311
36
26
3
33
1.74
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18086--18458
117
3.2
117
81
5
398
34
26
4
34
1.77
18132--18364
88
2.6
85
79
8
261
35
27
3
33
1.75
18086--18554
59
8.0
59
75
8
257
32
26
5
34
1.81
18294--18447
29
5.3
29
70
13
127
34
27
5
31
1.81
21804--21883
21
3.7
21
78
8
81
48
18
0
32
1.49
27247--27285
20
1.9
21
89
5
62
35
30
0
33
1.58
29060--29090
5
6.2
5
100
0
62
61
0
0
38
0.96
32482--32518
13
2.8
14
88
8
51
75
5
2
16
1.10
32650--32694
21
2.3
18
85
11
54
15
0
22
62
1.33

Tables:   1

The End!