Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006583.1 Kokia drynarioides strain JFW-HI SEQ_121171, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63105

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4518--4610
46
2.0
46
100
0
186
21
17
21
39
1.92
10333--10360
3
9.3
3
100
0
56
32
0
35
32
1.58
12938--12977
19
2.1
19
85
0
53
55
2
2
40
1.27
13260--13287
3
9.3
3
100
0
56
67
0
0
32
0.91
29749--29799
25
2.0
25
92
0
84
60
3
19
15
1.50
37635--37689
25
2.1
27
90
6
87
34
7
10
47
1.66
38058--38091
17
1.9
18
88
5
52
32
2
2
61
1.26
41585--41635
23
2.2
24
82
10
61
35
1
27
35
1.68
41969--42007
18
2.1
18
90
4
60
69
7
0
23
1.14
43513--43549
19
1.9
19
88
0
56
51
0
2
45
1.15
43529--43570
14
2.9
14
80
16
50
50
2
0
47
1.14
43989--44084
20
4.9
20
70
23
71
53
0
1
45
1.07
43998--44080
29
2.9
29
92
1
141
55
0
0
44
0.99
44896--44932
19
2.0
19
89
5
58
62
0
0
37
0.96
56582--56618
2
19.5
2
83
10
51
45
0
2
51
1.15
57299--57350
19
2.8
18
82
8
68
34
0
7
57
1.27
58329--58366
3
12.7
3
86
10
51
0
63
0
36
0.95
62153--62177
5
5.0
5
100
0
50
20
60
0
20
1.37

Tables:   1

The End!