Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006597.1 Kokia drynarioides strain JFW-HI SEQ_121186, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29546

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3075--3162
29
3.0
29
75
8
88
37
5
25
31
1.79
3082--3495
30
14.0
30
75
7
265
37
2
24
35
1.71
3065--3495
59
7.3
58
74
7
271
37
3
24
35
1.71
3082--3377
119
2.5
118
79
3
324
36
3
25
34
1.74
4446--4517
22
3.3
22
86
3
101
58
5
6
29
1.47
4455--4529
34
2.2
35
86
11
111
60
4
6
29
1.41
5015--5130
57
2.0
57
85
6
155
23
8
26
41
1.83
5117--5753
78
8.2
78
84
3
681
26
19
30
23
1.98
5119--5753
234
2.7
233
85
2
792
26
19
30
23
1.98
5348--5755
39
10.5
39
72
4
293
26
19
30
23
1.98
10979--11130
29
5.2
30
80
7
143
40
1
20
36
1.64
13071--13128
24
2.4
24
88
0
80
18
24
13
43
1.87
13647--13772
48
2.6
49
91
1
191
33
28
10
27
1.90
14602--14657
23
2.5
22
82
8
76
33
3
10
51
1.54
14395--14873
228
2.1
228
98
0
922
32
5
17
44
1.73
15527--15554
6
4.7
6
100
0
56
14
0
0
85
0.59
23792--23832
14
3.1
14
80
13
52
46
0
0
53
1.00
23794--23851
18
3.4
17
79
11
57
43
0
0
56
0.99
23792--23864
28
2.5
29
77
16
71
43
0
1
54
1.08
24916--24959
21
2.2
20
84
8
54
27
4
2
65
1.23

Tables:   1

The End!