Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006601.1 Kokia drynarioides strain JFW-HI SEQ_121190, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48532

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41--67
6
4.5
6
100
0
54
0
33
0
66
0.92
331--389
28
2.1
28
84
6
75
28
8
3
59
1.43
1050--1153
17
6.4
17
71
19
87
53
3
0
41
1.25
1051--1155
46
2.3
46
91
0
165
54
3
0
40
1.25
1086--1120
11
3.2
11
87
0
52
54
2
0
42
1.15
1070--1135
29
2.3
28
84
5
78
57
4
1
36
1.28
7429--7459
16
1.9
16
93
0
53
45
12
6
35
1.68
7515--7552
15
2.5
15
87
8
51
36
0
2
60
1.11
8499--8541
19
2.3
19
84
8
52
58
4
0
37
1.19
9488--9537
26
2.0
26
81
18
61
60
6
2
32
1.32
11430--11522
32
2.9
32
88
0
141
18
5
31
45
1.72
15143--15191
23
2.2
23
89
7
75
24
4
2
69
1.17
15155--15197
23
2.0
22
86
9
61
27
2
0
69
1.00
23370--23417
21
2.2
21
80
20
55
47
2
0
50
1.12
23380--23433
26
2.1
26
82
6
65
50
0
1
48
1.11
23377--23417
22
1.9
21
85
14
57
46
0
0
53
1.00
27177--27207
12
2.6
12
94
0
53
45
6
48
0
1.28
33661--33700
17
2.4
17
100
0
80
5
17
12
65
1.44
39931--40677
246
2.9
255
84
6
942
39
19
19
21
1.93
47999--48041
10
4.3
10
82
5
52
48
0
2
48
1.14

Tables:   1

The End!