Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006659.1 Kokia drynarioides strain JFW-HI SEQ_121251, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35296

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3273--3321
24
2.0
24
84
11
64
65
2
4
28
1.22
5924--6213
144
2.0
144
96
0
535
28
13
15
42
1.85
9323--9378
20
2.8
20
86
2
69
48
10
0
41
1.38
9342--9386
20
2.2
20
84
0
54
46
11
0
42
1.39
14862--14887
12
2.2
12
100
0
52
65
19
0
15
1.27
15091--15182
37
2.5
37
90
1
139
32
31
20
15
1.94
15163--15323
20
8.1
20
88
2
234
36
34
19
9
1.85
15605--15707
20
5.2
20
89
3
138
38
33
20
7
1.81
15608--15710
40
2.6
41
85
4
156
37
33
19
8
1.83
15223--15980
383
2.0
379
96
2
1394
39
22
10
26
1.87
24713--24737
2
12.5
2
100
0
50
48
0
0
52
1.00
29336--29361
2
13.0
2
100
0
52
50
0
0
50
1.00
29657--29979
43
7.3
43
81
7
342
28
26
20
24
1.99
29838--29938
53
1.9
53
97
0
193
29
29
20
19
1.97
29794--29979
96
1.9
96
91
0
300
27
28
20
22
1.99
33120--33184
22
3.0
22
79
6
78
53
0
0
46
1.00
33117--33178
14
4.2
15
72
24
60
50
0
0
50
1.00
34816--34866
21
2.4
21
93
0
93
39
7
43
9
1.67

Tables:   1

The End!