Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006675.1 Kokia drynarioides strain JFW-HI SEQ_121268, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  137423

Tables:   1   

This is table  1  of  1  ( 49 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1469--1601
70
1.9
67
86
4
185
33
10
12
44
1.76
7253--7477
59
3.9
60
74
15
192
26
16
13
43
1.85
7449--7538
45
2.0
46
86
6
130
31
11
16
41
1.83
7505--7843
58
5.8
58
75
11
212
26
17
16
38
1.91
7552--7843
118
2.5
116
79
8
288
25
17
16
40
1.90
7548--7843
58
5.0
60
75
11
254
25
18
16
39
1.91
8572--8608
13
3.0
13
84
11
51
64
0
0
35
0.94
10013--10094
6
12.7
6
73
16
58
28
4
3
63
1.32
10013--10107
30
3.2
30
84
3
120
29
5
3
62
1.33
10894--11167
59
4.6
60
75
10
274
41
16
17
24
1.90
10894--11262
121
3.1
119
79
10
319
40
16
17
26
1.90
10908--11297
59
6.5
57
75
15
238
41
16
15
26
1.88
10968--11347
121
3.1
120
76
12
350
41
15
15
27
1.88
11102--11321
62
3.6
59
78
11
214
40
14
16
29
1.88
11187--11350
62
2.7
62
82
7
158
40
14
17
28
1.88
22298--22327
7
4.3
7
100
0
60
26
16
30
26
1.97
23322--23401
18
4.4
18
74
13
76
20
21
26
32
1.97
23322--23418
18
5.4
18
73
10
56
21
20
24
32
1.97
42843--42901
23
2.6
23
94
5
102
49
3
11
35
1.56
43311--43387
22
3.4
22
84
10
93
10
25
22
41
1.85
46411--46500
47
1.9
47
86
0
126
32
23
18
25
1.97
69014--69056
17
2.4
18
88
7
61
67
0
2
30
1.03
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
76304--76365
18
3.2
18
82
17
72
67
1
4
25
1.19
76441--76575
9
14.0
9
71
16
60
66
3
2
26
1.23
76441--76505
20
3.4
19
82
14
71
66
1
3
29
1.16
76808--76856
20
2.5
20
86
3
64
22
4
2
71
1.13
76912--76956
10
4.5
10
78
10
56
35
0
0
64
0.94
76912--76973
20
3.2
19
82
8
63
35
3
0
61
1.12
76912--76982
30
2.5
30
86
6
94
32
2
1
63
1.18
79993--80049
28
2.1
27
80
9
62
26
3
3
66
1.24
80002--80122
18
6.8
18
72
14
83
27
2
3
66
1.19
80052--80122
17
4.1
16
81
16
72
26
0
2
70
1.01
80058--80130
17
4.2
16
80
14
67
26
0
4
69
1.06
90875--90918
19
2.3
20
80
11
56
52
0
0
47
1.00
91204--91420
107
2.0
107
88
0
317
34
11
13
40
1.81
93498--93689
61
3.1
61
78
8
203
48
13
14
23
1.78
113530--113560
3
10.3
3
100
0
62
35
32
0
32
1.58
113950--113999
22
2.2
23
82
7
57
30
4
12
54
1.55
114167--114206
19
2.2
19
86
4
55
35
0
10
55
1.34
113914--114454
137
3.9
138
78
6
533
42
2
9
45
1.51
114370--114406
19
1.9
19
88
0
56
51
2
5
40
1.39
113914--114451
138
3.9
135
78
9
417
42
2
8
45
1.50
115825--115855
3
10.3
3
100
0
62
67
0
0
32
0.91
118173--118243
35
2.0
35
100
0
142
33
16
11
38
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
119980--120031
23
2.3
23
82
0
68
42
21
23
13
1.88
130450--130501
22
2.4
22
87
6
70
36
13
15
34
1.87
130472--130585
35
3.2
35
79
8
133
33
17
15
33
1.92
132542--132616
37
2.0
38
85
12
102
38
24
9
28
1.86
136283--136316
14
2.4
14
85
5
50
55
2
0
41
1.15

Tables:   1

The End!