Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01006722.1 Kokia drynarioides strain JFW-HI SEQ_121318, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3344
ACGTcount: A:0.32, C:0.17, G:0.17, T:0.34


Found at i:2944 original size:8 final size:8

Alignment explanation


    Indices: 2931--2955  Score: 50
    Period size: 8  Copynumber: 3.1  Consensus size: 8

       2921 AAGACAATCG

                    
       2931 ACCATTTA
          1 ACCATTTA

                    
       2939 ACCATTTA
          1 ACCATTTA

                    
       2947 ACCATTTA
          1 ACCATTTA

             
       2955 A
          1 A

       2956 GACAAACGAC


Statistics
Matches: 17,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   8   17  1.00

ACGTcount: A:0.40, C:0.24, G:0.00, T:0.36


Consensus pattern (8 bp):   
ACCATTTA
Done.