Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006757.1 Kokia drynarioides strain JFW-HI SEQ_121355, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62624

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5421--5462
19
2.4
16
79
20
57
21
4
14
59
1.53
5427--5465
19
2.1
19
100
0
78
25
5
15
53
1.62
11428--11548
57
2.1
59
89
3
183
42
20
13
23
1.88
13404--13455
27
2.0
26
85
10
72
42
1
3
51
1.31
16286--16328
2
21.5
2
100
0
86
48
0
0
51
1.00
16360--16418
31
1.9
31
83
13
77
62
10
3
23
1.42
16928--17104
62
2.9
61
87
4
248
25
15
18
40
1.90
17117--17300
63
3.0
62
85
1
251
27
20
16
35
1.94
17347--17469
59
2.1
60
81
4
142
43
16
15
25
1.87
20477--20515
2
19.5
2
89
0
60
46
0
53
0
1.00
22835--22893
31
1.9
31
82
0
73
28
15
11
44
1.82
27428--27467
2
20.0
2
100
0
80
50
0
0
50
1.00
37696--37732
18
2.1
18
89
0
56
10
62
8
18
1.52
40654--40793
76
1.9
72
85
8
194
21
28
5
45
1.73
46455--46538
44
1.9
44
97
0
159
41
26
14
17
1.88
55692--55726
18
2.0
17
88
5
52
0
17
0
82
0.66
61019--61048
9
3.4
9
90
9
53
10
0
0
90
0.47
62260--62325
4
16.2
4
78
9
62
65
0
33
1
1.02
62260--62292
17
1.9
17
100
0
66
69
0
30
0
0.88
62260--62320
25
2.5
26
78
10
74
65
0
34
0
0.93
62262--62319
29
2.1
27
87
6
80
65
0
34
0
0.93

Tables:   1

The End!