Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006794.1 Kokia drynarioides strain JFW-HI SEQ_121393, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32920

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
517--581
29
2.2
29
91
0
103
38
15
16
29
1.90
5084--5119
16
2.3
16
90
4
56
25
2
0
72
0.98
9739--9813
29
2.6
29
85
6
91
48
2
0
49
1.15
9775--9816
21
2.0
20
86
4
57
50
2
0
47
1.14
10445--10489
20
2.3
19
88
3
63
60
8
6
24
1.51
10757--10803
15
3.1
15
84
6
67
42
2
0
55
1.12
10757--10810
15
3.5
15
82
5
63
46
1
0
51
1.11
13076--13122
15
3.2
15
78
6
60
59
2
2
36
1.21
14035--14068
6
5.7
6
100
0
68
35
47
0
17
1.48
19123--19371
53
4.7
53
84
0
329
35
21
14
28
1.93
19123--19371
106
2.4
105
91
0
399
35
21
14
28
1.93
20596--20683
28
3.1
28
68
12
79
34
21
14
29
1.93
23132--23177
18
2.5
19
79
10
51
43
4
0
52
1.21
23990--24039
23
2.2
23
92
0
82
52
6
14
28
1.65
29679--29722
21
2.2
20
87
4
61
63
0
2
34
1.07
30580--30631
23
2.3
23
86
6
70
44
7
23
25
1.79
32579--32791
101
2.1
101
99
0
417
32
20
22
24
1.98

Tables:   1

The End!