Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006852.1 Kokia drynarioides strain JFW-HI SEQ_121451, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  136573

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1901--1946
18
2.6
18
82
0
56
21
28
36
13
1.91
6820--6900
33
2.5
33
89
0
117
2
40
11
45
1.53
13162--13206
18
2.5
17
75
10
54
31
6
11
51
1.63
13901--13926
13
2.0
13
100
0
52
7
23
15
53
1.67
16830--16868
13
3.2
12
86
10
53
35
0
10
53
1.35
17327--17372
13
3.5
13
77
16
51
30
0
2
67
1.03
17318--17372
27
2.1
26
86
10
76
32
0
1
65
1.03
17318--17373
14
4.1
14
79
20
50
32
0
1
66
1.03
24424--24448
12
2.1
12
100
0
50
24
8
8
60
1.52
28618--28686
31
2.2
31
97
0
129
40
10
11
37
1.75
30890--30927
20
1.9
20
100
0
76
34
5
36
23
1.78
40401--40481
42
1.9
42
89
0
126
29
18
18
33
1.95
47527--47563
7
5.3
7
100
0
74
27
27
13
32
1.94
51503--51533
13
2.5
13
94
5
55
32
0
6
61
1.21
53549--53581
17
2.1
17
88
11
52
57
12
27
3
1.49
58695--58751
11
5.1
11
73
10
53
8
0
7
84
0.79
79965--79998
15
2.2
16
89
5
52
47
0
0
52
1.00
82712--82754
17
2.5
18
88
7
63
65
2
0
32
1.06
86508--86538
2
15.5
2
100
0
62
48
0
0
51
1.00
92157--92199
21
2.0
21
100
0
86
55
0
9
34
1.32
92609--92644
2
18.0
2
94
0
63
47
0
52
0
1.00
96731--96779
22
2.3
21
82
10
55
44
2
6
46
1.39
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96746--96794
23
2.2
23
85
3
64
44
2
4
48
1.33
97406--97459
22
2.4
22
81
3
63
33
0
1
64
1.04
97939--97980
19
2.3
19
79
4
50
76
4
0
19
0.96
98664--98707
23
1.9
23
90
0
70
45
29
2
22
1.65
98664--98713
23
2.1
23
85
3
64
48
28
2
22
1.62
102107--102141
19
1.9
17
88
11
52
85
0
5
8
0.73
108057--108117
29
2.1
29
81
6
70
54
3
8
34
1.47
108555--108595
4
10.2
4
100
0
82
24
24
0
51
1.49
111029--111067
5
7.6
5
94
5
69
0
0
56
43
0.99
112372--112410
2
19.5
2
100
0
78
0
0
48
51
1.00
112673--112716
15
3.1
15
87
9
58
29
0
45
25
1.54
116780--116829
4
12.5
4
86
0
64
44
26
6
24
1.76
123418--123449
3
10.7
3
100
0
64
34
65
0
0
0.93
128009--128080
30
2.4
30
84
8
94
44
1
2
51
1.24

Tables:   1

The End!