Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006862.1 Kokia drynarioides strain JFW-HI SEQ_121461, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71680

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1451--1485
15
2.4
15
90
4
54
62
0
0
37
0.95
1878--1917
19
2.1
19
90
9
64
50
0
0
50
1.00
4393--4452
31
1.9
32
93
3
104
25
8
20
46
1.78
4937--5068
67
2.0
67
90
0
210
18
14
24
43
1.87
7000--7060
31
1.9
34
87
12
94
40
0
9
49
1.36
8238--8288
18
3.1
18
68
26
58
50
0
1
47
1.12
8247--8294
23
2.1
23
85
11
64
47
0
2
50
1.12
15644--15873
113
2.0
113
88
0
343
33
16
6
43
1.73
18575--18606
13
2.4
13
94
5
55
84
0
3
12
0.74
35235--35287
27
2.0
27
85
7
72
30
3
3
62
1.30
35278--35309
16
2.0
16
93
0
55
25
3
0
71
1.00
47047--47343
52
5.7
52
89
0
425
35
26
11
26
1.91
47047--47343
103
2.9
104
87
1
416
35
26
11
26
1.91
63925--63990
34
1.9
34
90
0
105
46
7
18
27
1.75
64052--64085
18
1.9
18
88
5
52
29
0
5
64
1.17
65279--65363
44
1.9
44
88
4
127
28
12
17
41
1.87
65680--65749
29
2.4
28
86
6
95
58
0
2
38
1.13
65934--65976
17
2.6
17
85
3
61
44
2
6
46
1.43

Tables:   1

The End!