Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01006909.1 Kokia drynarioides strain JFW-HI SEQ_121510, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2381
ACGTcount: A:0.36, C:0.20, G:0.16, T:0.28


Found at i:1477 original size:12 final size:12

Alignment explanation


    Indices: 1460--1484  Score: 50
    Period size: 12  Copynumber: 2.1  Consensus size: 12

       1450 TCACAGCTTA

                        
       1460 TATATATATATT
          1 TATATATATATT

                        
       1472 TATATATATATT
          1 TATATATATATT

             
       1484 T
          1 T

       1485 GGTGAGGGGT


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  12   13  1.00

ACGTcount: A:0.40, C:0.00, G:0.00, T:0.60


Consensus pattern (12 bp):   
TATATATATATT
Done.