Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006967.1 Kokia drynarioides strain JFW-HI SEQ_121573, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  158710

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11740--11783
23
1.9
23
85
0
61
52
2
2
43
1.26
12334--12367
16
2.1
17
88
5
52
52
5
5
35
1.50
13770--13795
13
2.0
13
100
0
52
61
7
0
30
1.24
19923--20031
37
2.9
37
93
0
164
38
33
20
8
1.82
19949--20011
21
3.2
21
61
21
55
36
33
22
7
1.83
28318--28357
16
2.5
16
87
0
53
40
2
2
55
1.27
28447--28522
37
2.1
37
85
9
102
28
27
14
28
1.95
31372--31399
14
2.0
14
100
0
56
7
14
28
50
1.69
37361--37418
30
1.9
30
83
13
75
39
10
0
50
1.37
47347--47417
20
3.5
20
72
14
63
8
4
15
71
1.25
47350--47417
22
3.2
21
77
8
75
8
4
14
72
1.26
47605--47674
27
2.6
26
79
6
68
32
0
7
60
1.24
52438--52488
24
2.1
24
92
0
84
21
11
11
54
1.68
54416--54466
24
2.1
24
85
0
66
23
9
9
56
1.61
56998--57059
21
2.9
22
90
4
92
14
9
1
74
1.15
68700--68750
24
2.1
24
92
0
84
56
9
9
23
1.61
71648--71722
39
1.9
39
100
0
150
38
13
8
40
1.74
74603--74649
6
7.8
6
92
0
76
70
12
14
2
1.26
74603--74661
18
3.3
18
90
0
82
71
10
13
5
1.29
87459--87486
6
4.7
6
100
0
56
85
0
0
14
0.59
104286--104328
17
2.5
18
81
11
54
51
9
0
39
1.34
107080--107125
25
1.9
25
86
8
69
34
0
2
63
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
108485--108541
28
2.0
28
96
0
105
28
5
10
56
1.55
108717--108761
19
2.4
19
81
7
56
37
0
4
57
1.19
109550--109579
16
1.9
16
93
6
53
16
13
0
70
1.18
109545--109605
22
2.8
22
87
7
72
14
11
1
72
1.20
109559--109605
21
2.2
22
92
3
78
14
8
2
74
1.15
115400--115464
8
7.9
8
75
11
60
67
1
3
27
1.14
115398--115506
17
6.5
17
69
17
59
61
0
3
33
1.20
115413--115508
8
11.9
8
68
13
54
61
1
3
34
1.19
116142--116182
15
2.9
14
82
7
55
60
2
0
36
1.10
119111--119186
29
2.6
30
72
25
81
51
1
5
42
1.33
119211--119243
16
2.0
17
88
5
50
66
0
0
33
0.92
133378--133444
30
2.2
30
83
5
80
38
0
8
52
1.33
133579--133614
18
2.0
18
89
10
56
44
2
0
52
1.15
139248--139280
2
16.5
2
100
0
66
48
0
0
51
1.00
140461--140489
5
6.0
5
96
4
51
82
17
0
0
0.66
143174--143237
28
2.2
29
86
2
85
59
6
4
29
1.42
150689--150737
25
2.0
25
88
8
73
53
2
2
42
1.24
151663--151687
7
3.6
7
100
0
50
60
28
0
12
1.32
151823--151856
18
1.9
18
88
5
52
50
0
0
50
1.00

Tables:   1

The End!