Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01006983.1 Kokia drynarioides strain JFW-HI SEQ_121589, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  100753

Tables:   1   

This is table  1  of  1  ( 61 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7086--7201
26
4.6
25
76
5
126
38
1
9
50
1.45
7151--7176
8
3.2
8
100
0
52
46
0
0
53
1.00
7138--7267
16
8.2
16
67
6
59
50
1
4
43
1.32
7112--7267
50
3.1
50
76
14
176
46
1
7
44
1.38
7187--7267
8
10.5
8
68
7
51
54
1
3
40
1.26
7256--7319
26
2.5
26
89
0
110
37
0
10
51
1.37
7308--7354
8
6.0
8
83
11
62
63
4
0
31
1.13
7335--7402
34
2.0
34
85
5
93
48
4
2
44
1.38
13302--13380
35
2.3
35
100
0
158
26
15
26
31
1.95
16486--16567
31
2.8
27
77
15
74
40
12
10
36
1.78
17186--17222
18
2.0
18
89
5
56
62
2
5
29
1.31
17053--17420
196
1.8
203
82
8
477
46
12
10
30
1.75
17437--17648
9
23.0
9
71
20
127
29
3
1
65
1.19
17437--17621
10
19.9
10
69
18
64
31
3
1
63
1.20
17490--17640
46
3.3
45
76
13
125
30
2
1
65
1.14
17515--17546
15
2.0
17
88
11
50
21
3
0
75
0.95
24002--24036
16
2.2
16
94
0
61
31
22
0
45
1.53
31956--31998
15
2.9
14
82
6
50
37
0
0
62
0.95
35165--35236
14
5.3
14
68
18
62
61
22
2
13
1.46
35168--35236
27
2.6
27
100
0
138
60
21
2
14
1.47
35105--35271
90
1.9
89
87
1
244
54
21
4
19
1.61
53736--53867
70
1.9
70
87
0
192
38
21
16
23
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53943--53970
13
2.2
13
100
0
56
14
50
7
28
1.69
58684--58716
16
2.1
16
94
0
57
39
9
24
27
1.85
68634--68667
17
1.9
17
88
5
50
67
0
0
32
0.91
68634--68668
18
1.9
18
88
0
52
68
0
0
31
0.90
69362--69453
10
9.4
9
73
21
53
61
3
0
34
1.12
69360--69421
32
2.0
29
82
14
72
64
3
0
32
1.09
69362--69423
19
3.1
19
75
13
61
66
3
0
30
1.08
69363--69566
38
5.4
38
68
19
108
58
4
1
35
1.27
69378--69490
37
3.0
38
75
13
101
60
2
0
36
1.17
69360--69565
10
21.7
9
70
19
50
58
4
1
35
1.27
69540--69564
9
2.8
9
100
0
50
56
0
0
44
0.99
69506--69564
21
3.2
18
73
19
50
55
5
0
38
1.22
69515--69570
28
2.0
28
82
10
69
55
7
0
37
1.27
69779--69846
30
2.3
30
82
5
84
32
0
7
60
1.24
69779--69877
20
4.9
20
72
14
71
31
1
6
61
1.27
77764--77876
19
6.1
18
72
13
79
59
1
0
38
1.14
77746--77916
10
18.0
9
71
17
98
60
2
1
35
1.20
77778--77888
37
2.9
36
80
10
114
60
1
0
36
1.14
80286--80311
3
8.7
3
100
0
52
0
0
65
34
0.93
80622--80671
8
6.5
8
77
9
59
46
8
4
42
1.52
80620--80671
22
2.4
22
93
0
86
46
9
3
40
1.55
81313--81342
9
3.3
9
95
0
51
36
0
0
63
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
86960--87036
36
2.2
35
88
6
111
25
14
11
48
1.78
92204--92234
15
2.1
15
93
0
53
51
3
0
45
1.17
92848--92901
29
1.9
28
85
7
74
62
5
3
27
1.34
93856--93928
34
2.2
33
74
9
78
61
1
0
36
1.05
93937--93993
19
3.0
19
78
0
69
52
1
5
40
1.34
94222--94282
10
6.3
10
81
7
63
26
1
1
70
1.06
94227--94282
19
2.9
19
84
7
69
23
1
1
73
1.03
94229--94286
9
6.6
8
84
7
53
20
1
1
75
0.97
94274--94348
28
2.6
29
80
4
80
37
1
1
60
1.14
96382--96532
35
4.3
35
84
0
167
16
27
17
38
1.91
96432--96562
35
3.7
35
82
5
149
17
32
16
33
1.93
96981--97073
36
2.6
35
77
6
89
35
23
7
33
1.83
99638--99983
30
11.7
30
78
10
320
33
2
28
35
1.70
99633--99983
59
5.9
58
82
8
386
33
2
28
35
1.70
100652--100725
17
4.2
17
84
5
94
51
1
1
45
1.18
100659--100727
23
3.0
22
81
14
77
55
1
1
42
1.18
100651--100726
6
13.0
6
82
10
86
51
1
1
46
1.17

Tables:   1

The End!