Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007016.1 Kokia drynarioides strain JFW-HI SEQ_121622, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49097

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1685--1832
27
5.4
27
75
7
120
31
18
20
30
1.96
3162--3259
38
2.6
38
72
13
94
30
19
13
36
1.90
3727--3791
32
2.0
32
100
0
130
27
6
18
47
1.72
3727--3779
17
3.2
17
66
28
51
26
3
22
47
1.68
4139--4173
16
2.2
16
94
0
61
25
14
0
60
1.35
9331--9476
54
2.7
54
79
5
150
36
13
22
28
1.91
9589--9707
29
4.1
28
80
10
125
26
12
25
36
1.91
9589--9707
57
2.1
58
85
7
163
26
12
25
36
1.91
14532--14585
17
3.0
17
76
10
54
70
1
1
25
1.07
15111--15191
20
4.0
20
73
17
76
6
7
17
69
1.33
15110--15149
21
2.0
20
85
5
53
5
7
17
70
1.30
15214--15272
12
5.0
12
74
12
59
8
8
16
66
1.43
15467--15498
16
2.0
16
93
0
55
28
0
9
62
1.26
16440--16488
20
2.5
20
100
0
98
30
12
22
34
1.91
21051--21093
2
21.5
2
85
0
59
48
46
4
0
1.22
21046--21093
16
3.0
16
81
0
60
52
43
4
0
1.20
21672--21737
17
3.9
17
95
0
114
54
12
16
16
1.71
23243--23297
17
3.2
17
71
0
56
43
10
21
23
1.84
23725--23764
21
1.9
21
85
10
55
2
32
7
57
1.40
31658--31872
43
5.0
43
86
1
245
32
17
21
28
1.96
31713--32136
45
9.6
45
83
3
422
28
17
24
29
1.97
31773--32136
89
4.1
88
80
9
354
28
17
24
29
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31773--32136
134
2.8
134
83
5
440
28
17
24
29
1.97
33664--33718
17
3.2
17
76
0
65
45
10
25
18
1.82
34212--34304
48
1.9
48
95
0
168
29
10
29
31
1.91
42150--42404
43
5.9
43
82
0
287
30
17
22
29
1.97
42150--42534
86
4.4
87
79
3
375
29
17
22
30
1.97
42145--42395
129
1.9
129
84
3
335
30
17
21
30
1.96
42237--42579
43
7.8
44
77
7
184
30
17
22
30
1.96
42410--42579
45
3.8
44
83
4
191
30
17
20
31
1.96
42410--42576
88
1.9
90
83
2
212
31
17
20
30
1.96
43474--43510
7
5.6
7
87
9
51
2
21
0
75
0.92
46872--47090
43
5.1
43
87
1
271
29
28
16
25
1.97
47025--47162
68
2.0
69
87
1
197
31
29
14
24
1.95
47095--47195
43
2.3
43
91
0
166
28
31
14
24
1.95
46982--47194
111
1.9
112
85
0
293
30
30
15
24
1.95

Tables:   1

The End!