Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007027.1 Kokia drynarioides strain JFW-HI SEQ_121634, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  111443

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3166--3208
6
7.0
6
80
15
52
0
18
0
81
0.69
3169--3208
5
7.8
5
86
13
55
0
17
0
82
0.67
11932--11976
24
1.9
24
81
4
56
60
8
2
28
1.39
12339--12364
3
8.7
3
100
0
52
69
0
0
30
0.89
15797--16133
51
6.6
51
89
1
523
32
18
23
26
1.97
25126--25156
14
2.2
14
100
0
62
32
0
12
54
1.38
31497--31551
23
2.4
22
80
16
67
20
3
0
76
0.94
33896--33955
21
2.8
22
85
7
61
16
8
1
73
1.16
33894--33953
16
3.9
15
74
10
50
16
8
1
73
1.16
43744--44081
167
2.0
167
97
0
640
43
7
24
23
1.80
50543--50882
184
1.8
180
80
8
396
39
15
19
26
1.90
51401--51449
22
2.2
22
92
0
80
24
14
14
46
1.81
54284--54663
189
2.0
189
97
0
724
21
12
23
42
1.86
56461--56496
18
2.0
18
88
0
54
52
16
11
19
1.73
62676--62708
15
2.1
16
88
5
50
33
3
6
57
1.38
68666--68694
2
14.5
2
100
0
58
48
0
0
51
1.00
73189--73229
20
2.0
20
86
13
57
43
0
0
56
0.99
73718--73759
22
2.1
19
86
13
57
28
2
2
66
1.16
75355--75398
18
2.4
18
80
0
52
63
0
0
36
0.95
85251--85294
6
7.3
6
100
0
88
0
0
36
63
0.95
85264--85305
18
2.3
18
87
0
57
7
0
30
61
1.22
85847--85880
13
2.6
13
95
0
59
14
17
23
44
1.86
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
94941--94980
17
2.3
18
83
12
57
10
7
25
57
1.57
99102--99160
24
2.5
24
81
10
59
37
5
0
57
1.21
99152--99239
15
6.0
14
68
17
54
45
1
3
50
1.26
99136--99279
58
2.5
58
83
7
159
41
2
3
52
1.30
99451--99505
16
3.4
16
78
9
67
27
27
5
40
1.78
107498--107539
21
1.9
23
85
9
61
35
4
7
52
1.50
107617--107651
6
5.8
6
90
10
54
17
0
0
82
0.66
107617--107650
17
1.9
18
94
5
61
17
0
0
82
0.67
107639--107680
19
2.3
19
87
4
59
33
0
0
66
0.92
109087--109129
22
2.0
22
86
9
61
58
0
0
41
0.98
109423--109456
18
1.9
18
88
5
52
29
0
5
64
1.17
109590--109629
15
2.6
16
84
4
55
65
0
0
35
0.93

Tables:   1

The End!