Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007030.1 Kokia drynarioides strain JFW-HI SEQ_121638, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51024

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1244--1300
26
2.2
26
83
0
69
59
7
1
31
1.34
4070--4119
26
2.0
26
84
11
68
18
24
4
54
1.61
4572--4636
32
2.0
32
85
5
87
24
0
9
66
1.21
4701--4762
27
2.3
27
86
5
81
17
27
32
22
1.97
20261--20315
28
2.0
28
88
0
83
36
27
10
25
1.89
21917--22243
23
14.2
23
86
0
456
45
13
5
35
1.67
35783--35967
41
4.6
41
84
5
225
21
26
14
37
1.92
35809--35963
79
2.0
79
85
2
213
23
26
12
38
1.90
35983--36079
40
2.4
40
84
0
113
24
20
16
38
1.93
35995--36089
40
2.4
40
87
3
129
23
18
18
38
1.93
36620--36789
58
2.9
58
83
9
200
43
0
2
52
1.20
38426--38491
24
2.7
24
79
9
80
68
19
7
4
1.32
38426--38502
26
3.1
25
80
10
95
67
19
7
5
1.35
39904--40089
88
2.1
86
78
5
196
40
16
8
34
1.78
40116--40300
9
20.6
9
66
23
52
64
1
1
32
1.10
40154--40190
19
1.9
19
89
10
58
51
0
0
48
1.00
40184--40292
41
2.8
38
70
16
87
66
0
1
30
1.08
40221--40300
10
8.4
9
73
19
65
70
1
0
28
0.96
40221--40300
18
4.2
19
83
12
94
70
1
0
28
0.96
40221--40294
20
3.8
20
81
12
82
68
1
0
29
0.97
40222--40347
48
2.6
47
82
7
137
65
2
3
28
1.20
40311--40368
19
2.9
19
77
12
55
60
5
8
25
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
40540--40580
21
2.0
21
90
9
66
19
4
4
70
1.24
40646--40714
17
3.9
17
71
16
50
30
1
1
66
1.09
40731--40905
89
2.0
89
85
4
237
34
8
17
40
1.80
42109--42137
2
14.5
2
100
0
58
48
0
0
51
1.00
44075--44114
20
2.0
21
85
5
55
37
0
0
62
0.95
46915--46949
17
2.1
17
88
0
52
51
0
0
48
1.00
50668--50715
19
2.5
20
82
3
62
50
0
2
47
1.12
50987--51024
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!