Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007060.1 Kokia drynarioides strain JFW-HI SEQ_121669, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  71911

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1416--1710
158
1.9
158
89
2
459
23
24
22
29
1.99
5064--5113
26
2.0
26
92
4
84
46
12
14
28
1.79
13126--13210
44
1.9
44
95
0
152
28
25
20
25
1.99
15422--15557
57
2.3
58
80
6
132
44
16
17
20
1.86
23574--23639
28
2.3
30
78
19
79
48
0
12
39
1.40
23574--23639
27
2.3
29
75
17
68
48
0
12
39
1.40
33830--33900
24
3.0
24
85
0
88
29
11
5
53
1.59
33838--33916
24
3.3
24
81
0
77
30
12
7
49
1.68
37560--37625
24
2.8
24
95
0
114
25
12
7
54
1.63
39423--39497
24
3.1
24
92
0
114
24
12
9
54
1.66
48331--48385
24
2.2
25
93
3
94
27
12
7
52
1.65
48835--48891
27
2.1
27
96
0
105
28
29
10
31
1.90
49986--50035
26
2.0
25
84
4
64
50
0
4
46
1.20
55895--55947
18
2.9
19
78
13
58
64
0
0
35
0.94
56226--56306
3
27.0
3
76
5
56
55
4
4
34
1.43
57393--57788
29
13.7
29
72
14
250
33
27
5
33
1.79
57393--57788
58
6.8
58
77
10
359
33
27
5
33
1.79
57393--57668
86
3.2
86
78
11
258
34
27
4
34
1.77
69548--70359
206
4.0
205
86
2
1067
37
19
20
22
1.95
70772--70843
6
12.0
6
72
16
60
40
2
0
56
1.13
70772--70837
17
3.6
17
89
8
87
39
3
0
57
1.14
70763--70817
29
1.9
28
85
3
74
40
1
1
56
1.21

Tables:   1

The End!