Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007061.1 Kokia drynarioides strain JFW-HI SEQ_121670, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52868

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3360--3492
64
2.1
64
97
0
248
39
10
9
41
1.71
4311--4439
60
2.2
60
94
0
222
58
17
4
19
1.56
5625--5726
17
5.8
17
73
15
82
53
1
6
37
1.39
5626--5758
17
7.9
15
70
17
59
54
1
6
36
1.36
5680--5756
33
2.3
34
78
10
88
53
1
5
40
1.32
5680--5757
31
2.4
31
80
8
84
53
1
5
39
1.31
6077--6225
76
2.0
76
95
0
271
28
18
21
31
1.97
13738--13848
17
6.5
17
83
6
143
42
0
2
54
1.21
14463--14508
20
2.4
19
85
10
58
58
0
2
39
1.10
15145--15172
10
2.8
10
100
0
56
17
50
21
10
1.77
15567--16032
30
16.2
28
73
12
203
32
24
3
38
1.74
15643--15988
30
12.0
30
78
12
330
32
25
4
37
1.76
15618--16032
29
14.4
29
78
8
357
33
24
4
38
1.74
15585--15975
173
2.3
171
89
3
574
32
24
3
38
1.74
32497--32527
13
2.3
14
94
5
55
38
19
6
35
1.77
33686--34059
58
6.4
57
77
12
298
38
4
25
31
1.77
33686--34055
30
12.6
29
69
12
177
38
4
25
31
1.77
33806--33903
28
3.5
28
75
9
92
36
3
26
33
1.72
35993--36070
17
4.5
17
80
1
93
58
2
2
35
1.25
40084--40136
21
2.5
21
78
0
61
20
20
26
32
1.98
44046--44070
12
2.1
12
100
0
50
36
24
0
40
1.55
44479--44579
24
4.2
24
89
0
157
23
24
16
34
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48843--48921
27
2.9
27
96
0
140
27
20
24
27
1.99
49465--49651
24
7.8
24
81
2
169
22
27
18
32
1.97

Tables:   1

The End!