Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007156.1 Kokia drynarioides strain JFW-HI SEQ_121768, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40918

Tables:   1   

This is table  1  of  1  ( 39 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4943--4968
7
3.7
7
100
0
52
53
15
0
30
1.42
11231--11263
16
2.1
16
88
5
50
3
9
45
42
1.51
11761--11983
39
5.7
39
73
6
135
24
9
31
34
1.87
11765--11939
78
2.2
79
86
3
246
24
9
33
33
1.87
11796--11973
40
4.5
40
75
5
137
25
10
29
34
1.89
11923--13576
38
42.8
38
67
12
531
27
16
23
33
1.95
11923--13052
155
7.3
152
72
10
438
27
16
23
32
1.96
12154--12395
117
2.1
114
83
3
297
26
15
25
32
1.96
12269--13652
79
17.8
77
73
10
341
27
15
22
33
1.95
12440--12667
117
1.9
117
82
3
280
28
18
21
31
1.97
12761--13052
151
1.9
152
84
3
392
28
16
22
32
1.96
12957--13169
117
1.8
114
84
5
284
28
15
23
32
1.95
12761--13371
269
2.3
263
77
8
658
28
16
21
33
1.95
13367--13653
79
3.6
79
82
7
368
26
15
22
35
1.94
13391--13680
41
7.3
41
70
12
192
26
14
24
34
1.94
13341--13677
158
2.1
160
81
8
422
26
15
24
34
1.94
13986--14137
49
3.1
48
70
12
121
18
28
17
36
1.93
14171--14389
98
2.2
98
82
3
235
19
30
17
33
1.95
14247--14389
49
2.9
49
73
8
155
18
30
16
34
1.93
16200--16238
9
4.4
9
84
15
55
0
17
0
82
0.68
16201--16237
13
2.9
12
92
8
56
0
18
0
81
0.70
16226--16278
21
2.5
21
68
0
52
7
20
5
66
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19400--19454
24
2.3
24
81
3
67
41
0
3
54
1.18
19413--19464
24
2.2
24
82
6
61
40
0
1
57
1.10
19395--19522
61
2.1
62
91
1
204
41
1
5
51
1.34
24527--24590
32
2.0
32
87
6
94
34
1
9
54
1.42
24718--24774
24
2.6
21
76
13
62
43
10
0
45
1.38
25874--25970
29
3.5
29
81
13
100
48
1
2
48
1.20
26957--26993
18
2.1
17
90
5
56
29
0
0
70
0.88
26975--27044
29
2.4
29
86
6
97
48
0
0
51
1.00
26960--27026
17
4.1
17
69
21
54
46
0
0
53
1.00
27006--27049
23
2.0
23
87
12
67
56
0
0
43
0.99
27806--27867
31
1.9
34
87
9
94
32
0
1
66
1.02
27812--27870
17
3.6
16
76
19
59
30
0
1
67
1.00
28669--28706
19
2.0
19
100
0
76
68
5
0
26
1.11
37207--37264
30
1.9
30
96
0
107
22
0
18
58
1.39
37394--37428
11
3.1
12
88
12
56
68
0
0
31
0.90
38897--38932
12
3.1
12
84
8
56
72
16
5
5
1.23
40262--40300
21
1.9
20
84
5
51
53
10
0
35
1.35

Tables:   1

The End!