Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01007210.1 Kokia drynarioides strain JFW-HI SEQ_121824, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2756
ACGTcount: A:0.28, C:0.20, G:0.17, T:0.34


Found at i:1517 original size:14 final size:14

Alignment explanation


    Indices: 1498--1524  Score: 54
    Period size: 14  Copynumber: 1.9  Consensus size: 14

       1488 GCTTTCCTGA

                          
       1498 TATGGCTCCGAAAG
          1 TATGGCTCCGAAAG

                         
       1512 TATGGCTCCGAAA
          1 TATGGCTCCGAAA

       1525 ATGCACTTTG


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   13  1.00

ACGTcount: A:0.30, C:0.22, G:0.26, T:0.22


Consensus pattern (14 bp):   
TATGGCTCCGAAAG
Done.