Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007344.1 Kokia drynarioides strain JFW-HI SEQ_121960, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30154

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
433--474
11
4.1
10
82
17
59
50
0
0
50
1.00
414--474
20
3.0
20
82
17
72
49
0
0
50
1.00
410--513
51
2.1
51
92
5
176
47
0
0
51
1.07
4332--4375
4
11.8
4
88
9
58
81
0
18
0
0.68
4333--4378
18
2.5
19
89
3
67
82
0
17
0
0.67
4336--4391
22
2.5
22
82
0
67
76
0
23
0
0.78
4533--4567
18
2.0
18
88
5
54
28
0
14
57
1.38
5294--5347
23
2.4
22
78
9
72
53
1
7
37
1.40
5538--5586
16
3.2
16
73
26
61
59
8
0
32
1.27
5619--5713
30
3.2
30
67
8
86
36
5
12
45
1.65
6882--6966
43
2.0
43
81
9
102
31
10
9
48
1.70
7818--7869
21
2.5
21
81
6
61
51
25
1
21
1.57
7838--7888
14
3.6
14
79
10
59
45
23
5
25
1.75
7812--7897
7
12.3
7
69
14
52
46
27
3
22
1.68
7822--7897
28
2.8
28
85
2
100
46
26
3
23
1.70
7831--7912
28
2.9
28
83
3
85
45
26
4
23
1.73
10755--10779
4
6.2
4
100
0
50
0
24
0
76
0.80
14836--14941
31
3.5
30
72
10
81
24
18
14
42
1.88
14836--15005
59
2.9
59
86
0
223
22
17
12
47
1.82
15256--15314
31
1.9
31
86
6
84
44
10
20
25
1.83
15392--15475
17
4.7
17
75
8
78
42
1
3
52
1.26
15392--15473
11
6.8
12
72
13
62
43
1
3
51
1.27
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15392--15473
6
13.7
6
72
12
62
43
1
3
51
1.27
16147--16254
12
9.8
12
68
18
65
52
2
2
41
1.30
16173--16254
3
27.3
3
75
4
58
56
3
1
39
1.25
17269--17586
30
10.8
29
85
5
336
35
27
3
32
1.75
17269--17599
59
5.6
59
81
4
346
35
28
3
32
1.75
17913--18104
96
2.0
96
82
8
230
29
17
14
39
1.88
27503--27531
14
2.0
15
93
6
51
0
37
6
55
1.27
29234--29270
18
2.1
18
95
5
67
37
5
0
56
1.22

Tables:   1

The End!