Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007387.1 Kokia drynarioides strain JFW-HI SEQ_122005, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48283

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2911--2939
14
2.1
14
100
0
58
34
0
0
65
0.93
3474--3524
22
2.4
22
75
21
54
33
1
3
60
1.26
5054--5244
95
2.0
96
83
7
246
37
13
19
29
1.90
5550--5776
29
7.8
29
77
12
216
33
1
26
37
1.67
5550--5776
59
3.9
58
83
9
268
33
1
26
37
1.67
7736--7785
6
8.7
6
76
8
50
48
0
4
48
1.20
7736--7785
23
2.2
23
88
0
73
48
0
4
48
1.20
7738--7780
11
3.8
11
81
6
50
53
0
4
41
1.21
7755--7799
17
2.6
18
82
3
56
53
2
4
40
1.33
8327--8399
13
5.5
13
70
13
51
36
0
0
63
0.95
8355--8392
8
4.9
8
84
15
53
34
0
0
65
0.93
15128--15161
18
1.9
17
88
5
50
50
0
8
41
1.34
19449--19474
8
3.2
8
100
0
52
69
0
0
30
0.89
30005--30238
124
1.9
123
85
6
321
32
10
16
39
1.83
32760--32807
25
2.0
24
83
4
60
47
12
12
27
1.77
37987--38019
14
2.3
15
89
5
50
78
9
0
12
0.95
42194--42243
10
4.9
10
75
4
55
36
0
0
64
0.94
42185--42245
21
3.0
21
73
4
63
36
0
0
63
0.94
42234--42266
14
2.3
15
89
5
50
42
0
0
57
0.98
42256--42300
18
2.6
18
83
13
58
42
0
6
51
1.28
42269--42322
27
1.9
29
81
7
67
35
0
3
61
1.14
47379--47427
22
2.2
23
81
3
55
48
4
0
46
1.20

Tables:   1

The End!