Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007388.1 Kokia drynarioides strain JFW-HI SEQ_122006, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  159069

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7440--7765
158
2.1
158
86
1
447
28
22
23
24
1.99
11072--11135
24
2.7
24
90
0
110
46
3
20
29
1.66
21368--21397
2
15.0
2
100
0
60
50
0
0
50
1.00
23102--23148
20
2.3
20
100
0
94
29
25
31
12
1.93
23613--23662
25
2.0
26
88
4
75
54
2
6
38
1.37
24975--25022
2
24.0
2
100
0
96
50
0
0
50
1.00
30422--30475
24
2.4
21
84
12
63
61
1
3
33
1.25
44419--44618
102
2.0
103
82
5
244
30
16
20
32
1.95
55507--55540
18
1.9
17
94
5
59
70
11
0
17
1.16
58638--58684
2
23.5
2
100
0
94
0
0
48
51
1.00
65650--65712
33
2.0
31
84
9
83
25
6
7
60
1.48
66026--66077
23
2.2
23
82
3
59
53
17
0
28
1.44
70311--70357
19
2.5
20
79
6
53
19
4
6
70
1.26
70691--70752
30
2.1
30
90
0
97
58
12
4
24
1.54
70793--70819
11
2.5
11
100
0
54
66
0
7
25
1.17
70823--70875
22
2.6
20
82
8
63
67
11
11
9
1.41
70826--70872
21
2.2
22
81
11
53
70
8
10
10
1.35
76943--76974
16
2.0
16
100
0
64
37
31
0
31
1.58
94460--94497
19
2.0
19
85
10
51
21
5
23
50
1.69
108465--108503
14
2.7
15
80
8
53
56
10
7
25
1.59
108883--108928
24
1.9
23
86
8
65
54
4
4
36
1.40
110604--110669
29
2.4
29
82
7
84
25
6
7
60
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112511--112609
47
2.1
47
96
0
180
46
16
10
27
1.78
112509--112583
22
3.3
22
68
17
71
48
14
12
25
1.78
114741--114765
11
2.3
11
100
0
50
0
0
8
92
0.40
120341--120525
96
1.9
96
82
4
230
36
14
17
31
1.90
120889--121112
29
7.8
27
73
13
123
32
2
26
37
1.71
120904--121162
58
4.5
57
81
8
281
33
1
27
37
1.66
120915--121132
29
7.5
29
82
8
239
33
1
26
38
1.67
122961--123044
6
14.7
6
71
14
70
54
4
1
39
1.29
122942--123045
17
6.1
17
83
0
118
54
4
0
39
1.28
127880--128131
90
2.8
90
80
0
263
25
25
16
33
1.96
129588--129633
24
1.9
24
91
8
76
60
0
2
36
1.09
130676--130762
22
3.8
23
78
11
99
6
6
20
65
1.40
130712--130759
25
1.9
25
91
0
78
6
6
20
66
1.36
132492--132546
22
2.5
22
80
11
69
50
20
0
29
1.48
132751--132897
68
2.2
68
91
2
233
25
19
25
30
1.98
137079--137116
19
2.0
19
100
0
76
36
26
21
15
1.93
139071--139128
29
2.0
29
86
6
82
24
18
13
43
1.87
147463--147503
19
2.2
19
90
0
64
41
12
0
46
1.41
157005--157044
20
2.0
20
85
0
53
35
0
2
62
1.09
158046--158088
22
1.9
23
85
4
61
39
9
13
37
1.78

Tables:   1

The End!