Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007484.1 Kokia drynarioides strain JFW-HI SEQ_122108, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73213

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10999--11032
17
2.0
17
88
11
52
79
0
5
14
0.91
10988--11053
31
2.1
32
83
13
84
75
1
6
16
1.07
11023--11056
14
2.4
14
90
0
50
73
0
5
20
1.04
11228--11258
16
2.0
15
93
6
53
70
6
0
22
1.09
14493--14596
47
2.2
49
81
6
124
55
7
2
33
1.43
15257--15301
3
15.0
3
100
0
90
66
0
0
33
0.92
15623--16157
51
10.5
51
86
3
594
26
14
31
28
1.95
15623--16164
153
3.5
151
85
3
658
26
14
31
27
1.95
17284--17561
90
3.1
89
88
1
403
24
24
26
25
2.00
19022--19107
45
1.9
44
81
6
102
48
11
2
37
1.52
27278--27329
19
2.7
19
73
8
52
34
5
3
55
1.42
28495--28542
21
2.3
21
85
3
62
14
4
12
68
1.34
28503--28628
24
5.3
25
67
16
63
14
3
11
70
1.29
28492--28631
35
4.1
32
75
17
104
13
4
11
70
1.30
28638--28684
21
2.3
20
85
3
58
23
0
0
76
0.78
28656--28693
11
3.5
11
85
7
51
31
0
2
65
1.06
28647--28691
21
2.3
19
80
7
54
28
0
2
68
1.01
34597--34639
21
2.0
22
86
4
61
62
0
2
34
1.08
38697--38736
14
2.9
14
80
0
53
35
0
0
65
0.93
43444--43520
31
2.5
30
80
15
79
41
0
5
53
1.23
66488--66543
29
1.9
29
82
7
69
41
1
0
57
1.09

Tables:   1

The End!