Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007494.1 Kokia drynarioides strain JFW-HI SEQ_122118, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68515

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4438--4588
77
2.0
77
93
0
257
48
10
13
27
1.75
4583--4671
31
2.9
30
78
5
97
24
15
19
40
1.90
6563--6591
12
2.3
13
94
5
51
3
13
0
82
0.79
9387--9579
66
2.9
66
75
7
181
20
33
16
29
1.94
9387--9653
135
2.0
135
81
2
309
20
32
16
29
1.95
30350--30403
17
3.1
16
77
15
54
70
3
3
22
1.19
32773--32816
4
11.0
4
90
0
61
52
18
0
29
1.46
38487--38530
3
14.7
3
100
0
88
31
0
0
68
0.90
42377--42450
22
3.4
22
80
9
89
6
6
20
66
1.39
42435--42467
16
2.1
16
94
0
57
6
3
18
72
1.18
42392--42475
21
4.2
20
72
18
59
5
7
19
67
1.35
42482--42573
20
4.2
22
76
19
77
8
2
21
67
1.29
42515--42553
12
3.2
12
85
0
51
5
2
20
71
1.17
42498--42553
23
2.5
24
83
13
75
5
3
23
67
1.27
42521--42560
12
3.3
12
85
0
53
7
0
22
70
1.12
42689--42767
27
2.9
27
79
7
79
24
1
8
65
1.28
60029--60067
20
2.0
20
89
0
60
64
5
0
30
1.15
61477--61526
21
2.5
20
84
12
68
0
32
2
66
1.03
61898--62459
279
2.0
283
82
7
690
37
19
14
28
1.91
64314--64352
19
2.1
19
90
0
60
23
17
15
43
1.87
66563--66605
18
2.4
18
80
7
52
46
4
0
48
1.22
68347--68403
11
4.9
11
81
12
60
71
0
26
1
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
68358--68400
4
10.8
4
81
18
54
74
0
25
0
0.82
68397--68442
9
5.3
9
87
7
69
56
0
41
2
1.11
68384--68440
18
3.5
17
86
11
75
61
0
36
1
1.07

Tables:   1

The End!