Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007554.1 Kokia drynarioides strain JFW-HI SEQ_122182, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41893

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2931--2970
15
2.7
15
84
0
53
52
7
7
32
1.58
4642--4719
27
2.8
28
74
16
81
41
0
3
55
1.18
4729--4772
10
4.7
9
84
15
54
20
0
13
65
1.26
7912--7993
9
9.7
9
69
26
54
50
1
0
48
1.08
7914--7990
30
2.7
28
80
11
102
48
1
0
50
1.09
7913--7955
21
2.0
22
90
4
70
44
2
0
53
1.13
8039--8107
35
2.0
35
94
0
120
20
37
1
40
1.61
8926--9025
52
2.0
51
90
7
159
46
0
1
53
1.07
9671--9718
3
17.3
3
79
16
59
0
31
0
68
0.90
9671--9715
8
5.9
8
78
19
51
0
31
0
68
0.89
9671--9718
11
4.6
11
82
15
66
0
31
0
68
0.90
14508--14592
6
14.7
6
71
20
65
45
0
2
51
1.13
14508--14589
34
2.4
34
87
6
121
45
0
2
52
1.14
14554--14602
24
2.1
23
88
3
71
48
0
2
48
1.12
14508--14602
34
2.8
34
84
6
95
46
0
2
51
1.12
14508--14589
17
4.8
16
86
7
101
45
0
2
52
1.14
14643--14675
17
1.9
17
93
0
57
45
27
6
21
1.75
15368--15418
16
3.1
16
78
15
59
58
3
1
35
1.28
16417--16519
29
3.5
30
84
5
129
33
28
4
33
1.78
21675--22010
158
2.1
158
83
2
415
30
24
23
21
1.99
22030--22097
26
2.6
26
85
0
91
26
22
25
26
2.00
38324--38360
19
2.0
18
89
5
56
43
2
8
45
1.47

Tables:   1

The End!