Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007557.1 Kokia drynarioides strain JFW-HI SEQ_122185, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35058

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
937--988
7
7.4
7
82
0
68
30
25
25
19
1.98
937--988
21
2.5
21
90
0
86
30
25
25
19
1.98
1032--1065
15
2.3
15
94
0
59
11
8
32
47
1.71
2770--2937
30
5.7
30
72
10
121
41
25
10
23
1.85
2770--2937
60
2.8
58
79
7
167
41
25
10
23
1.85
2905--2964
29
2.1
28
81
9
68
41
21
8
28
1.82
5379--5407
12
2.4
12
100
0
58
31
0
0
68
0.89
8339--8393
20
2.8
20
80
0
65
20
34
16
29
1.94
10854--10913
29
2.1
29
87
0
84
35
10
11
43
1.75
11298--11326
15
1.9
15
100
0
58
24
0
0
75
0.80
11298--11352
9
6.4
9
72
19
55
25
0
1
72
0.94
13097--13130
17
2.0
17
88
0
50
50
14
5
29
1.67
14179--14225
23
2.1
22
84
4
58
38
0
0
61
0.96
14360--14401
13
2.9
14
80
13
50
54
0
0
45
0.99
14364--14400
16
2.3
16
86
13
58
59
0
0
40
0.97
16808--16847
21
1.9
21
84
0
53
25
0
22
52
1.47
26008--26057
20
2.6
19
84
12
59
2
26
0
72
0.96
26013--26057
15
3.1
15
87
9
58
2
26
0
71
0.98

Tables:   1

The End!