Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01007565.1 Kokia drynarioides strain JFW-HI SEQ_122193, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 5388
ACGTcount: A:0.34, C:0.19, G:0.14, T:0.33


Found at i:772 original size:15 final size:15

Alignment explanation


    Indices: 752--781  Score: 60
    Period size: 15  Copynumber: 2.0  Consensus size: 15

        742 AATTTCATGC

                           
        752 TTCAATCACCATGTT
          1 TTCAATCACCATGTT

                           
        767 TTCAATCACCATGTT
          1 TTCAATCACCATGTT

        782 ATCACTTAGC


Statistics
Matches: 15,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  15   15  1.00

ACGTcount: A:0.27, C:0.27, G:0.07, T:0.40


Consensus pattern (15 bp):   
TTCAATCACCATGTT
Done.