Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007617.1 Kokia drynarioides strain JFW-HI SEQ_122248, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  69877

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4308--4353
24
1.9
24
81
0
56
32
4
4
58
1.37
4361--4387
2
13.5
2
100
0
54
51
0
0
48
1.00
15376--15458
33
2.5
33
74
1
87
14
18
15
51
1.76
15653--15795
57
2.5
57
83
0
187
19
26
14
39
1.90
18147--18177
16
1.9
16
93
0
53
48
0
6
45
1.28
21880--21950
24
3.0
25
77
8
67
33
11
15
39
1.83
21893--21951
23
2.5
24
86
2
75
33
11
15
38
1.84
21916--21962
23
2.0
23
84
8
60
40
10
17
31
1.83
25452--25511
16
3.6
16
76
12
59
76
0
16
6
0.99
38325--38383
29
2.0
30
86
3
84
27
8
15
49
1.73
38553--38631
31
2.6
30
84
8
88
41
12
8
36
1.74
39105--39141
18
2.1
18
100
0
74
37
10
13
37
1.80
40643--40680
18
2.2
18
86
13
53
26
2
5
65
1.27
44758--44790
13
2.6
13
90
4
50
48
6
0
45
1.27
44885--44972
44
2.0
44
86
0
122
34
9
4
52
1.54
62184--62238
3
19.0
3
92
7
96
32
0
0
67
0.91
67085--67125
20
2.0
20
90
0
64
53
4
9
31
1.55

Tables:   1

The End!