Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01007706.1 Kokia drynarioides strain JFW-HI SEQ_122337, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 10746
ACGTcount: A:0.36, C:0.17, G:0.16, T:0.31


Found at i:7895 original size:6 final size:6

Alignment explanation


    Indices: 7884--7919  Score: 63
    Period size: 6  Copynumber: 6.0  Consensus size: 6

       7874 GCGATTCCCA

                                           *         
       7884 TCCTTC TCCTTC TCCTTC TCCTTC TCCATC TCCTTC
          1 TCCTTC TCCTTC TCCTTC TCCTTC TCCTTC TCCTTC

       7920 AGTCCCACCC


Statistics
Matches: 28,  Mismatches: 2, Indels: 0
        0.93            0.07        0.00

Matches are distributed among these distances:
   6   28  1.00

ACGTcount: A:0.03, C:0.50, G:0.00, T:0.47


Consensus pattern (6 bp):   
TCCTTC

Done.