Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007769.1 Kokia drynarioides strain JFW-HI SEQ_122402, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47296

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1123--1221
52
1.9
50
90
10
155
19
6
5
69
1.28
1119--1224
49
2.1
50
91
5
169
19
8
4
66
1.36
1126--1245
52
2.3
52
82
7
143
21
10
4
64
1.41
2873--2947
39
1.9
39
86
5
107
8
18
38
34
1.80
2964--3010
15
3.1
15
82
11
60
2
19
40
38
1.63
2980--3055
33
2.3
33
95
0
134
5
22
38
34
1.77
2965--3055
33
2.8
33
88
4
116
4
21
38
35
1.74
12497--12535
20
2.0
20
84
0
51
56
10
2
30
1.46
16682--16920
125
1.9
126
86
0
345
35
12
13
37
1.84
19798--19835
20
1.9
20
89
10
60
36
18
0
44
1.50
21538--21585
21
2.4
19
87
12
78
33
0
27
39
1.57
21543--21594
21
2.5
21
100
0
104
36
0
30
32
1.58
24419--24465
14
3.4
14
79
2
51
48
2
10
38
1.50
24599--24638
14
2.9
14
85
3
55
57
2
0
40
1.12
28703--28755
21
2.5
21
81
0
70
32
24
15
28
1.95
30594--30638
20
2.2
20
84
7
56
31
15
2
51
1.56
31662--32052
195
2.0
196
92
1
651
39
22
12
25
1.89
35627--35660
17
2.0
17
100
0
68
41
23
11
23
1.87
40723--40808
36
2.3
38
82
8
113
40
1
4
53
1.29
44587--44812
30
7.6
30
81
5
219
38
1
21
38
1.62
45668--45711
20
2.2
20
95
0
79
43
4
6
45
1.51
45663--45699
14
2.6
14
95
0
65
43
5
5
45
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45668--45718
20
2.5
20
84
12
77
45
3
7
43
1.51
45687--45926
124
1.9
125
96
0
446
28
10
13
47
1.76
46066--46096
13
2.4
13
94
0
53
32
12
45
9
1.75
47017--47135
42
3.0
38
75
15
105
26
18
28
26
1.98
47025--47143
39
2.9
40
76
17
120
26
18
29
26
1.98
47108--47251
39
3.7
40
69
18
124
25
19
31
23
1.98
47084--47292
78
2.7
77
80
5
249
25
18
33
22
1.97

Tables:   1

The End!