Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007795.1 Kokia drynarioides strain JFW-HI SEQ_122429, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  85186

Tables:   1   

This is table  1  of  1  ( 25 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
48--266
117
1.9
117
80
0
258
21
25
22
30
1.99
6574--6619
24
1.9
23
86
8
65
56
6
4
32
1.45
12748--12779
15
2.1
15
100
0
64
25
18
28
28
1.98
27603--27667
33
2.0
33
84
6
87
29
32
10
27
1.90
27981--28121
44
3.2
44
89
1
212
46
8
17
27
1.76
29964--30046
19
4.4
19
70
19
66
38
2
2
56
1.25
29971--30059
27
3.3
25
68
15
70
38
2
2
57
1.24
29981--30072
29
3.2
29
67
11
82
39
4
1
55
1.27
29967--30090
56
2.2
56
94
0
212
37
3
2
57
1.28
29982--30217
128
1.9
124
79
10
264
40
3
2
53
1.31
39623--39657
19
1.9
17
88
11
52
2
17
0
80
0.84
40703--41245
273
2.0
273
94
0
944
27
22
16
33
1.95
53365--53404
21
2.0
21
95
5
73
47
10
12
30
1.74
53401--53425
13
1.9
13
100
0
50
48
12
16
24
1.79
56708--56783
38
2.0
38
97
0
143
35
17
15
31
1.91
60696--60738
21
2.0
21
81
0
50
34
23
13
27
1.93
61481--61672
52
3.7
53
88
3
284
35
25
13
26
1.93
61481--61672
105
1.8
104
89
1
303
35
25
13
26
1.93
61785--61825
2
20.5
2
87
9
57
51
0
4
43
1.23
61784--61830
22
2.1
22
100
0
94
51
0
8
40
1.33
65558--65601
21
2.1
21
100
0
88
18
15
34
31
1.92
66860--66926
13
4.9
13
71
10
53
35
16
8
38
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67110--67179
34
2.1
34
100
0
140
28
2
21
47
1.65
68818--68875
22
2.6
22
78
7
64
29
17
25
27
1.97
80715--80754
20
2.0
20
85
0
53
15
5
15
65
1.44

Tables:   1

The End!