Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01007840.1 Kokia drynarioides strain JFW-HI SEQ_122477, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3291
ACGTcount: A:0.38, C:0.13, G:0.14, T:0.35


Found at i:1913 original size:6 final size:6

Alignment explanation


    Indices: 1902--1927  Score: 52
    Period size: 6  Copynumber: 4.3  Consensus size: 6

       1892 CACACACCTC

                                          
       1902 TCATCT TCATCT TCATCT TCATCT TC
          1 TCATCT TCATCT TCATCT TCATCT TC

       1928 TTCCTTTTTT


Statistics
Matches: 20,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   20  1.00

ACGTcount: A:0.15, C:0.35, G:0.00, T:0.50


Consensus pattern (6 bp):   
TCATCT

Done.