Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007856.1 Kokia drynarioides strain JFW-HI SEQ_122495, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49503

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5041--5087
6
7.0
7
83
13
55
82
2
2
12
0.84
5041--5087
13
3.5
13
80
13
60
82
2
2
12
0.84
5041--5087
20
2.3
20
89
7
69
82
2
2
12
0.84
5402--5436
19
1.9
18
88
11
54
40
8
5
45
1.58
13323--13385
31
2.0
31
96
0
117
39
20
15
23
1.91
22897--23230
58
5.6
59
77
13
339
29
21
15
33
1.94
22834--23230
58
6.7
59
76
11
304
29
20
15
34
1.93
22888--23211
180
1.8
178
86
4
472
28
21
15
34
1.94
23068--23240
56
3.0
56
82
10
192
27
21
14
36
1.92
27090--27142
22
2.4
21
75
9
52
47
1
3
47
1.31
27193--27427
83
3.2
72
75
17
185
42
4
3
48
1.40
27266--27478
83
2.5
83
92
3
338
41
4
2
51
1.36
29909--30000
30
3.1
30
87
3
114
25
7
4
63
1.40
29952--30006
17
3.5
16
71
19
53
21
12
3
61
1.46
30824--31290
62
7.8
59
74
12
305
33
15
19
32
1.93
30839--31298
120
3.8
117
78
9
441
34
15
18
31
1.92
34391--34417
6
4.5
6
100
0
54
33
0
48
18
1.49
38103--38173
27
2.7
26
84
4
106
30
0
16
52
1.45
43705--43752
21
2.2
21
81
3
51
39
2
2
56
1.23

Tables:   1

The End!