Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007871.1 Kokia drynarioides strain JFW-HI SEQ_122512, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48525

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1125--1175
21
2.4
21
100
0
102
47
3
0
49
1.20
2049--2097
21
2.3
21
79
10
55
28
28
14
28
1.95
2878--3318
192
2.3
194
84
2
550
25
26
19
27
1.99
6516--6619
36
2.9
37
88
8
160
34
22
12
30
1.91
6698--6983
23
12.4
23
86
0
401
46
14
5
33
1.68
7237--7474
98
2.4
98
87
0
343
30
14
15
39
1.88
10633--10766
7
19.3
7
70
7
85
37
23
17
22
1.94
10624--10766
28
5.1
28
75
4
119
37
22
17
22
1.94
10662--10762
35
2.9
35
95
0
175
36
23
17
21
1.95
14004--14038
17
2.0
17
88
5
52
42
8
0
48
1.33
14183--14243
21
2.9
21
71
24
56
31
0
1
67
1.01
17487--17519
17
1.9
17
88
11
50
42
18
0
39
1.50
17809--17867
29
2.0
29
86
0
82
28
33
16
20
1.95
18016--18246
23
10.2
23
65
15
97
30
24
8
36
1.86
18019--18178
68
2.3
68
91
3
250
31
23
8
36
1.86
18158--18246
23
4.0
22
81
7
99
32
23
7
35
1.84
18019--18207
68
2.8
67
87
5
220
30
22
8
37
1.85
18123--18243
45
2.7
45
84
5
156
28
24
9
37
1.86
18355--18394
15
2.8
16
78
21
52
45
0
20
35
1.51
33794--33859
34
1.9
34
87
6
98
19
21
12
46
1.82
33802--33859
17
3.4
17
75
0
53
20
18
12
48
1.80
46934--47074
28
5.0
27
78
10
122
31
30
14
23
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46942--47021
14
5.7
14
74
0
70
35
31
11
22
1.89

Tables:   1

The End!