Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01000793.1 Kokia drynarioides strain JFW-HI SEQ_111863, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 865

Length: 1442
ACGTcount: A:0.35, C:0.19, G:0.14, T:0.32


Found at i:98 original size:2 final size:2

Alignment explanation


    Indices: 86--124  Score: 69
    Period size: 2  Copynumber: 19.5  Consensus size: 2

         76 AAATTTACAA

                  *                                                   
         86 AC AC CC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC A
          1 AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC AC A

        125 TATATATATA


Statistics
Matches: 35,  Mismatches: 2, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
   2   35  1.00

ACGTcount: A:0.49, C:0.51, G:0.00, T:0.00


Consensus pattern (2 bp):   
AC

Done.