Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007947.1 Kokia drynarioides strain JFW-HI SEQ_122595, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84438

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4090--4117
1
28.0
1
100
0
56
0
0
0
100
0.00
4128--4154
1
27.0
1
100
0
54
0
0
0
100
0.00
10038--10070
12
2.8
12
95
0
57
12
15
18
54
1.71
10156--10215
24
2.6
23
78
2
66
28
13
18
40
1.88
15919--15950
2
16.0
2
100
0
64
50
0
0
50
1.00
17338--17379
12
3.6
12
77
6
50
23
14
21
40
1.90
17315--17384
23
3.0
23
82
2
86
28
11
18
41
1.85
21427--21506
28
2.9
28
81
7
90
27
16
28
27
1.97
23941--23991
25
2.0
26
84
3
68
62
7
7
21
1.48
27672--27753
31
2.7
30
80
9
96
34
7
13
45
1.71
28065--28095
12
2.6
12
94
0
53
25
0
6
67
1.14
30025--30076
27
2.0
27
88
11
81
48
7
11
32
1.68
31179--31404
121
1.9
123
92
1
384
29
9
15
46
1.76
36563--36595
6
5.5
6
100
0
66
30
0
54
15
1.41
37504--37611
31
3.6
31
70
10
109
35
12
12
40
1.79
37514--37631
58
2.0
58
100
0
236
33
11
13
41
1.81
41432--41484
19
2.7
20
82
11
65
60
7
0
32
1.25
50390--50452
28
2.3
29
75
10
69
30
0
7
61
1.24
51028--51397
69
5.4
69
78
0
364
36
26
17
20
1.94
51519--51594
39
2.0
37
84
5
98
47
1
3
47
1.29
56557--56607
20
2.6
19
72
9
50
68
0
1
29
1.00
57127--57174
23
2.2
21
78
10
51
50
0
2
47
1.12
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64069--64515
195
2.3
195
83
3
560
26
20
27
25
1.99
67288--67340
2
26.5
2
100
0
106
50
0
0
49
1.00
73883--73946
26
2.5
25
75
7
65
54
12
1
31
1.47
75398--75437
3
13.3
3
94
0
71
30
0
35
35
1.58
81965--82018
17
3.1
17
78
2
63
38
1
5
53
1.35
83795--83906
29
3.8
30
77
12
126
35
31
4
28
1.77
83793--83927
29
4.6
28
71
18
89
36
31
5
27
1.79

Tables:   1

The End!