Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007954.1 Kokia drynarioides strain JFW-HI SEQ_122602, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  151835

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1134--1199
31
2.1
31
83
5
80
36
10
16
36
1.84
44205--44299
17
5.6
17
78
2
102
36
3
5
54
1.39
44954--44999
3
14.7
3
86
8
65
63
0
0
36
0.95
47182--47220
20
2.0
20
94
0
69
51
0
0
48
1.00
47161--47221
19
3.2
19
76
4
68
49
1
0
49
1.10
54092--54128
19
1.9
19
94
0
65
16
0
18
64
1.29
58435--58476
17
2.3
18
84
15
52
61
2
2
33
1.21
59172--59212
2
20.5
2
100
0
82
0
0
51
48
1.00
67370--67462
34
2.7
34
85
5
107
38
0
6
54
1.26
68828--68867
19
2.0
20
85
4
55
32
10
7
50
1.64
70168--70206
19
2.1
19
90
0
60
25
20
15
38
1.92
80795--80835
21
2.0
20
85
4
55
34
14
9
41
1.79
81182--81224
22
2.0
21
86
13
61
60
4
0
34
1.17
101973--102033
25
2.5
24
84
7
79
50
0
0
49
1.00
102532--102588
25
2.5
22
83
16
71
29
0
0
70
0.88
105555--105580
6
4.3
6
100
0
52
15
19
15
50
1.79
110253--110314
16
3.5
17
73
23
56
8
17
1
72
1.17
126129--126185
27
2.1
27
87
3
80
36
7
1
54
1.38
126146--126190
15
3.3
14
74
25
51
40
6
2
51
1.41
142377--142481
42
2.8
36
80
17
131
33
7
2
56
1.43
142393--142483
42
2.2
42
100
0
182
30
7
2
59
1.38
142620--143376
137
5.6
137
83
9
962
26
19
19
33
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142682--143356
126
5.1
126
75
15
490
26
19
18
35
1.95
142809--143374
133
4.1
135
83
9
696
26
20
19
34
1.96

Tables:   1

The End!