Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01007967.1 Kokia drynarioides strain JFW-HI SEQ_122615, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3671
ACGTcount: A:0.39, C:0.12, G:0.13, T:0.36


Found at i:1787 original size:2 final size:2

Alignment explanation


    Indices: 1780--1811  Score: 64
    Period size: 2  Copynumber: 16.0  Consensus size: 2

       1770 CCTCCCATTT

                                                           
       1780 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
          1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA

       1812 AATGGATTTA


Statistics
Matches: 30,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   2   30  1.00

ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50


Consensus pattern (2 bp):   
TA

Done.