Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01007972.1 Kokia drynarioides strain JFW-HI SEQ_122621, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25753

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
111--270
30
5.4
29
77
6
135
33
25
6
35
1.82
554--587
17
2.0
17
88
0
50
41
0
2
55
1.15
2700--3656
178
5.3
182
84
5
1111
36
9
17
35
1.83
7402--7561
27
5.9
27
74
2
117
18
23
20
37
1.94
11279--11312
17
1.9
18
88
5
52
35
20
0
44
1.52
11734--11795
32
1.9
32
83
0
79
8
14
1
75
1.10
11746--11784
20
2.0
20
84
0
51
5
10
2
82
0.93
12576--12642
9
7.2
9
75
18
66
38
2
1
56
1.24
12555--12642
10
9.2
10
70
16
62
36
3
1
59
1.22
12999--13050
26
2.0
26
96
0
95
42
1
1
53
1.23
14731--14793
17
3.7
17
86
0
81
42
1
3
52
1.27
14761--14806
23
2.0
22
91
4
74
43
0
2
54
1.12
15428--15457
2
15.0
2
100
0
60
50
0
0
50
1.00
15509--15567
12
5.5
10
80
13
57
52
1
1
44
1.21
15738--15800
32
2.0
32
84
6
83
65
6
7
20
1.42
16664--17006
59
5.9
59
78
6
315
34
26
6
33
1.81
16664--16992
117
2.8
116
81
6
337
34
25
5
33
1.80
16809--17031
29
7.7
28
69
14
96
33
25
6
34
1.82
16632--17020
117
3.3
114
76
8
331
34
25
6
33
1.81
16636--17047
59
7.1
57
77
5
247
35
25
6
33
1.81
25614--25669
20
2.7
19
81
15
58
78
0
16
5
0.92
25613--25673
21
2.9
21
80
11
70
77
0
18
4
0.95

Tables:   1

The End!