Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008000.1 Kokia drynarioides strain JFW-HI SEQ_122652, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45072

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3158--3202
23
2.0
23
86
0
63
31
13
20
35
1.91
7829--7891
23
2.7
23
90
0
108
38
23
22
15
1.93
12919--13135
30
7.3
30
84
4
244
35
24
2
36
1.70
12919--13135
59
3.6
59
85
5
285
35
24
2
36
1.70
12919--13135
89
2.4
88
80
5
247
35
24
2
36
1.70
13204--13272
34
2.0
34
100
0
138
26
20
8
44
1.80
17241--17278
16
2.4
16
87
12
53
76
0
21
2
0.91
17325--17374
5
9.8
5
83
16
59
82
0
18
0
0.68
17318--17382
6
11.0
6
80
12
64
80
0
18
1
0.80
17332--17374
22
2.0
22
86
9
61
81
0
18
0
0.69
17241--17418
96
1.8
98
85
7
256
65
6
18
8
1.42
18107--18150
18
2.4
18
84
3
52
77
2
18
2
0.98
19044--19688
98
6.6
98
79
4
624
36
17
25
20
1.94
19059--19575
147
3.5
147
77
7
546
37
17
25
19
1.93
19044--19688
196
3.3
194
80
6
737
36
17
25
20
1.94
19044--19664
49
12.7
49
72
8
413
37
16
26
19
1.93
20020--20161
42
3.4
41
80
7
169
28
28
14
27
1.95
20147--20229
42
1.9
42
87
4
121
36
18
16
28
1.93
22517--22903
30
12.8
30
77
8
284
34
23
2
39
1.68
22512--22903
90
4.3
90
82
4
430
34
22
2
39
1.68
22511--22920
60
6.8
59
78
9
344
34
23
2
39
1.69
26051--26127
38
2.0
38
100
0
154
31
10
10
48
1.71
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26738--26777
20
2.0
20
100
0
80
15
0
30
55
1.41

Tables:   1

The End!