Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008023.1 Kokia drynarioides strain JFW-HI SEQ_122677, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  84267

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58--110
25
2.1
26
92
3
90
20
7
18
52
1.69
8431--8510
36
2.2
36
93
0
133
32
11
26
30
1.91
11767--11797
2
15.5
2
100
0
62
51
0
0
48
1.00
12607--12748
51
2.8
51
85
1
167
33
12
23
30
1.92
16786--17123
52
6.5
52
89
1
473
26
14
22
35
1.93
17617--17828
116
1.8
116
82
6
277
30
9
26
33
1.88
17915--17966
21
2.5
21
84
6
70
28
13
19
38
1.89
24173--24405
52
4.5
52
86
1
297
28
15
22
33
1.94
28244--28294
24
2.1
24
85
0
66
27
23
21
27
1.99
35981--36026
21
2.1
23
88
8
69
28
21
15
34
1.94
41958--42053
36
2.6
36
85
1
129
36
15
28
19
1.93
45417--46045
49
12.9
49
70
10
288
41
16
22
20
1.90
45421--45794
146
2.6
146
76
4
333
41
16
22
18
1.90
45451--45876
97
4.4
98
77
7
359
43
16
21
18
1.88
46097--46200
52
2.0
52
88
0
154
45
17
18
19
1.86
46754--46811
17
3.4
17
74
11
64
25
3
20
50
1.64
46796--46883
24
3.4
25
78
12
81
42
9
10
38
1.71
47082--47136
20
2.8
20
70
24
55
25
1
3
69
1.15
48892--49025
66
2.0
66
100
0
268
26
26
7
38
1.83
52300--52381
40
2.0
40
100
0
164
52
7
25
14
1.67
61951--61993
21
2.0
21
100
0
86
23
13
16
46
1.83
63442--63476
15
2.2
17
90
10
56
40
0
2
57
1.14
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64920--64959
21
1.9
21
89
0
62
27
2
27
42
1.68
65131--65173
7
5.7
7
83
10
50
39
0
30
30
1.57
65098--65214
53
2.2
53
84
6
157
37
6
26
29
1.82
66736--66791
25
2.2
25
81
12
62
73
0
25
1
0.93
83970--84014
23
2.0
23
86
0
63
31
26
6
35
1.82

Tables:   1

The End!