Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NTFQ01008038.1 Kokia drynarioides strain JFW-HI SEQ_122693, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  163781

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1503--1575
23
3.2
22
75
19
69
41
19
26
13
1.88
1498--1613
23
5.0
22
69
25
60
40
22
24
12
1.89
1557--1618
23
2.7
23
72
22
67
38
25
22
12
1.90
7465--7503
20
1.9
21
89
5
62
71
7
7
12
1.29
8489--8536
23
2.1
23
84
0
60
22
2
20
54
1.55
28894--29087
99
2.0
99
96
0
361
39
14
14
31
1.87
32914--32949
18
2.0
18
89
10
56
55
0
2
41
1.14
33216--33261
20
2.3
20
81
7
58
65
4
0
30
1.12
34859--35314
178
2.6
178
91
2
720
26
12
14
46
1.80
47681--47719
20
1.9
21
89
5
62
61
0
0
38
0.96
47665--47742
31
2.5
31
82
13
83
62
0
0
37
0.95
53657--53718
30
2.1
30
82
11
74
61
8
11
19
1.54
58031--58076
14
3.6
13
88
11
69
8
4
13
73
1.21
61246--61301
6
9.3
6
82
0
58
12
28
1
57
1.46
62384--62635
133
1.9
133
84
3
337
39
19
9
31
1.83
69706--69736
2
15.5
2
100
0
62
51
0
0
48
1.00
74572--74600
14
2.0
15
93
6
51
41
0
0
58
0.98
76309--76355
19
2.4
20
75
13
53
27
8
0
63
1.23
87545--87573
7
4.1
7
100
0
58
27
27
27
17
1.97
91763--91796
8
4.2
8
96
0
59
52
0
0
47
1.00
94146--94204
10
6.3
10
74
18
56
35
1
0
62
1.05
95142--95166
8
3.1
8
100
0
50
52
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
96104--96165
27
2.3
26
78
10
63
45
8
4
41
1.55
99913--100001
10
9.1
10
68
14
51
43
3
0
52
1.17
103655--103699
19
2.3
21
74
18
51
42
0
0
57
0.98
105887--106208
164
2.0
164
90
1
511
27
11
20
41
1.86
121334--121445
30
4.0
30
76
14
121
33
11
30
25
1.91
121363--121427
24
2.7
24
87
0
94
32
10
32
24
1.90
127002--127035
2
17.5
2
93
6
61
52
0
0
47
1.00
127045--127080
6
6.0
6
100
0
72
66
0
33
0
0.92
131852--131894
21
2.0
21
100
0
86
4
9
4
81
0.97
131964--132039
39
1.9
39
91
0
125
32
31
7
27
1.85
133336--133396
26
2.3
26
100
0
122
29
24
11
34
1.91
136782--136852
31
2.3
31
97
0
133
35
29
11
23
1.90
141161--141201
18
2.2
18
86
4
55
43
4
7
43
1.53
147222--147466
122
2.0
122
99
0
481
44
14
14
26
1.84
155079--155238
88
1.8
87
83
4
214
35
10
10
44
1.73
157251--157598
29
11.8
28
76
9
239
37
23
3
35
1.71
157578--157630
27
2.0
27
85
14
74
28
26
5
39
1.79
160235--160289
22
2.5
22
87
0
83
16
32
27
23
1.96
161073--161137
30
2.2
30
94
0
112
56
15
4
23
1.57

Tables:   1

The End!