Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NTFQ01008067.1 Kokia drynarioides strain JFW-HI SEQ_122723, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3505
ACGTcount: A:0.35, C:0.17, G:0.15, T:0.34


Found at i:2505 original size:4 final size:4

Alignment explanation


    Indices: 2496--2530  Score: 70
    Period size: 4  Copynumber: 8.8  Consensus size: 4

       2486 ACCTCAATTT

                                                       
       2496 CATA CATA CATA CATA CATA CATA CATA CATA CAT
          1 CATA CATA CATA CATA CATA CATA CATA CATA CAT

       2531 GTATTGTGAG


Statistics
Matches: 31,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   4   31  1.00

ACGTcount: A:0.49, C:0.26, G:0.00, T:0.26


Consensus pattern (4 bp):   
CATA

Done.